5K77
Dbr1 in complex with 7-mer branched RNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E (A, B, C, D, E) | RNA lariat debranching enzyme, putative | polymer | 360 | 41846.9 | 5 | UniProt (C4M1P9) Pfam (PF00149) Pfam (PF20890) | Entamoeba histolytica | |
| 2 | F, H, J, L, N (V, W, X, Y, Z) | branch 1 of branched RNA 5'-UAA(-2'GU)CA-3' | polymer | 5 | 1554.0 | 5 | Saccharomyces cerevisiae | ||
| 3 | G, I, K, M, O (v, w, x, y, z) | brnch 2 of branched RNA 5'-UAA(-2'GU)CA-3' | polymer | 2 | 606.4 | 5 | Saccharomyces cerevisiae | ||
| 4 | EA, P, PA, XA, Y (C, A, D, E, B) | ZINC ION | non-polymer | 65.4 | 5 | Chemie (ZN) | |||
| 5 | FA, OA, Q, WA, X (C, D, A, E, B) | FE (II) ION | non-polymer | 55.8 | 5 | Chemie (FE2) | |||
| 6 | AA, AB, BA, BB, CA... (B, E, C, D, A) | SULFATE ION | non-polymer | 96.1 | 25 | Chemie (SO4) | |||
| 7 | CB, DA, NA, VA, W (E, B, C, D, A) | HYDROXIDE ION | non-polymer | 17.0 | 5 | Chemie (OH) | |||
| 8 | DB, EB, FB, GB, HB... (A, B, C, D, E...) | water | water | 18.0 | 518 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E: 1 - 354 (UniProt: C4M1P9)
| PDB | External Database | Details |
|---|---|---|
| Ala 91 | His 91 | conflict |
| His 355 | - | expression tag |
| His 356 | - | expression tag |
| His 357 | - | expression tag |
| His 358 | - | expression tag |
| His 359 | - | expression tag |
| His 360 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 15 |
| Total formula weight | 220036.8 | |
| Non-Polymers* | Number of molecules | 40 |
| Total formula weight | 3092.9 | |
| All* | Total formula weight | 223129.7 |
