5K77
Dbr1 in complex with 7-mer branched RNA
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E | RNA lariat debranching enzyme, putative | polymer | 360 | 41846.9 | 5 | UniProt (C4M1P9) Pfam (PF00149) Pfam (PF20890) In PDB | Entamoeba histolytica | |
2 | V, W, X, Y, Z | branch 1 of branched RNA 5'-UAA(-2'GU)CA-3' | polymer | 5 | 1554.0 | 5 | Saccharomyces cerevisiae | ||
3 | v, w, x, y, z | brnch 2 of branched RNA 5'-UAA(-2'GU)CA-3' | polymer | 2 | 606.4 | 5 | Saccharomyces cerevisiae | ||
4 | C, A, D, E, B | ZINC ION | non-polymer | 65.4 | 5 | Chemie (ZN) | |||
5 | C, D, A, E, B | FE (II) ION | non-polymer | 55.8 | 5 | Chemie (FE2) | |||
6 | B, E, C, D, A | SULFATE ION | non-polymer | 96.1 | 25 | Chemie (SO4) | |||
7 | E, B, C, D, A | HYDROXIDE ION | non-polymer | 17.0 | 5 | Chemie (OH) | |||
8 | water | water | 18.0 | 518 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E: 1 - 354 (UniProt: C4M1P9)
PDB | External Database | Details |
---|---|---|
Ala 91 | His 91 | conflict |
His 355 | - | expression tag |
His 356 | - | expression tag |
His 357 | - | expression tag |
His 358 | - | expression tag |
His 359 | - | expression tag |
His 360 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 15 |
Total formula weight | 220036.8 | |
Non-Polymers* | Number of molecules | 40 |
Total formula weight | 3092.9 | |
All* | Total formula weight | 223129.7 |