5K5L
Homo sapiens CCCTC-binding factor (CTCF) ZnF6-8 and H19 sequence DNA complex structure
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | DNA (5'-D(*GP*TP*TP*GP*CP*CP*GP*CP*GP*TP*G)-3') | polymer | 11 | 3381.2 | 2 | synthetic construct | ||
| 2 | B, D (B, D) | DNA (5'-D(P*AP*CP*GP*CP*GP*GP*CP*AP*AP*C)-3') | polymer | 11 | 3328.2 | 2 | synthetic construct | ||
| 3 | E, F, G (E, F, G) | Transcriptional repressor CTCF | polymer | 93 | 10903.6 | 3 | UniProt (P49711) Pfam (PF00096) | Homo sapiens (Human) | 11-zinc finger protein,CCCTC-binding factor,CTCFL paralog |
| 4 | H, I, J, K, L... (E, F, G) | ZINC ION | non-polymer | 65.4 | 7 | Chemie (ZN) | |||
| 5 | O, P (E, G) | water | water | 18.0 | 2 | Chemie (HOH) |
Sequence modifications
E, F, G: 405 - 492 (UniProt: P49711)
| PDB | External Database | Details |
|---|---|---|
| Gly 400 | - | expression tag |
| Pro 401 | - | expression tag |
| Leu 402 | - | expression tag |
| Gly 403 | - | expression tag |
| Ser 404 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 7 |
| Total formula weight | 46129.6 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 457.9 | |
| All* | Total formula weight | 46587.4 |
