5JY0

Crystal structure of Porphyromonas endodontalis DPP11 in complex with substrate

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (A)	Asp/Glu-specific dipeptidyl-peptidase	polymer	703	79749.4	1	UniProt (F8WQK8) Pfam (PF10459)	Porphyromonas endodontalis	Dipeptidyl-peptidase 11,DPP11
2	B (B)	LEU-ASP-VAL	polymer	3	345.4	1		synthetic construct
3	C, D (A)	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL	non-polymer		122.1	2	Chemie (TRS)
4	E (A)	water	water		18.0	52	Chemie (HOH)

Sequence modifications

A: 22 - 717 (UniProt: F8WQK8)

PDB	External Database	Details
Met 21	-	initiating methionine
Ala 652	Ser 652	engineered mutation
His 718	-	expression tag
His 719	-	expression tag
His 720	-	expression tag
His 721	-	expression tag
His 722	-	expression tag
His 723	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	80094.7
Non-Polymers*	Number of molecules	2
	Total formula weight	244.3
All*	Total formula weight	80339.0

*Water molecules are not included.