5JXF

Crystal structure of Flavobacterium psychrophilum DPP11 in complex with dipeptide Arg-Asp

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D (A, B, C, D)	Asp/Glu-specific dipeptidyl-peptidase	polymer	731	82677.5	4	UniProt (A6GWM2) Pfam (PF10459)	Flavobacterium psychrophilum	Dipeptidyl-peptidase 11,DPP11
2	E, G (A, B)	ARGININE	non-polymer		175.2	2	Chemie (ARG)
3	F, H (A, B)	ASPARTIC ACID	non-polymer		133.1	2	Chemie (ASP)
4	I, J, K (C, D)	CHLORIDE ION	non-polymer		35.5	3	Chemie (CL)
5	L (D)	SODIUM ION	non-polymer		23.0	1	Chemie (NA)
6	M, N, O, P (A, B, C, D)	water	water		18.0	495	Chemie (HOH)

Sequence modifications

A, B, C, D: 18 - 713 (UniProt: A6GWM2)

PDB	External Database	Details
Met -17	-	initiating methionine
Gly -16	-	expression tag
Gly -15	-	expression tag
Ser -14	-	expression tag
His -13	-	expression tag
His -12	-	expression tag
His -11	-	expression tag
His -10	-	expression tag
His -9	-	expression tag
His -8	-	expression tag
Gly -7	-	expression tag
Met -6	-	expression tag
Ala -5	-	expression tag
Ser -4	-	expression tag
Met -3	-	expression tag
Thr -2	-	expression tag
Gly -1	-	expression tag
Gly 0	-	expression tag
Gln 1	-	expression tag
Gln 2	-	expression tag
Met 3	-	expression tag
Gly 4	-	expression tag
Arg 5	-	expression tag
Asp 6	-	expression tag
Leu 7	-	expression tag
Tyr 8	-	expression tag
Asp 9	-	expression tag
Asp 10	-	expression tag
Asp 11	-	expression tag
Asp 12	-	expression tag
Lys 13	-	expression tag
Asp 14	-	expression tag
Pro 15	-	expression tag
Thr 16	-	expression tag
Leu 17	-	expression tag
Ile 133	Val 133	conflict
Ser 442	Ala 442	conflict

Contents of the asymmetric unit

Polymers	Number of chains	4
	Total formula weight	330709.8
Non-Polymers*	Number of molecules	8
	Total formula weight	746.0
All*	Total formula weight	331455.8

*Water molecules are not included.