5JXF
Crystal structure of Flavobacterium psychrophilum DPP11 in complex with dipeptide Arg-Asp
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID23-1 |
| Synchrotron site | ESRF |
| Beamline | ID23-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2014-11-07 |
| Detector | DECTRIS PILATUS 6M-F |
| Wavelength(s) | 0.965 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 126.051, 70.689, 191.598 |
| Unit cell angles | 90.00, 97.26, 90.00 |
Refinement procedure
| Resolution | 46.831 - 2.100 |
| R-factor | 0.1984 |
| Rwork | 0.196 |
| R-free | 0.24380 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3woj |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.149 |
| Data reduction software | XDS |
| Data scaling software | SCALA (3.3.20) |
| Phasing software | PHASER |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 190.061 | 46.831 | 2.210 |
| High resolution limit [Å] | 2.100 | 6.640 | 2.100 |
| Rmerge | 0.026 | 0.666 | |
| Number of reflections | 193418 | ||
| <I/σ(I)> | 12.1 | 20.4 | 1.2 |
| Completeness [%] | 98.9 | 97.2 | 99.6 |
| Redundancy | 3.2 | 3.4 | 3.2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M NaBr, 0.1 M Bistris propane, pH 7.5, 20% PEG 3350 |
