5JBG
Crystal structure of chicken LGP2 with 5'ppp 26-mer hairpin RNA with 3' GG overhang and ADP-AlF4-Mg2+ at 2.0 A resolution.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | LGP2 | polymer | 680 | 77459.0 | 1 | UniProt (G0YYQ5) Pfam (PF04851) Pfam (PF18119) Pfam (PF00271) Pfam (PF11648) | Gallus gallus (Chicken) | |
| 2 | B (X) | RNA (5'-R(*GPPP*GP*AP*GP*CP*GP*UP*GP*CP*CP*GP*GP*GP*CP*AP*CP*GP*CP*UP*CP*CP*GP*G)-3') | polymer | 26 | 8565.0 | 1 | synthetic construct | ||
| 3 | C (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 4 | D (A) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) | |||
| 5 | E (A) | TETRAFLUOROALUMINATE ION | non-polymer | 103.0 | 1 | Chemie (ALF) | |||
| 6 | F (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 7 | G, H, I, J, K (A, X) | SULFATE ION | non-polymer | 96.1 | 5 | Chemie (SO4) | |||
| 8 | L, M (A, X) | water | water | 18.0 | 268 | Chemie (HOH) |
Sequence modifications
A: 2 - 674 (UniProt: G0YYQ5)
| PDB | External Database | Details |
|---|---|---|
| Gly -5 | - | expression tag |
| Ala -4 | - | expression tag |
| Met -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Ser 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 86024.0 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1100.2 | |
| All* | Total formula weight | 87124.2 |
