Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5JBG

Crystal structure of chicken LGP2 with 5'ppp 26-mer hairpin RNA with 3' GG overhang and ADP-AlF4-Mg2+ at 2.0 A resolution.

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003723molecular_functionRNA binding
A0003724molecular_functionRNA helicase activity
A0004386molecular_functionhelicase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0016787molecular_functionhydrolase activity
A0045087biological_processinnate immune response
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 701
ChainResidue
ACYS554
ACYS557
ACYS610
ACYS613

site_idAC2
Number of Residues20
Detailsbinding site for residue ADP A 702
ChainResidue
AGLY27
AALA28
AGLY29
ALYS30
ATHR31
AARG32
AGLU67
AASP444
AARG471
AALF703
AMG704
AHOH835
AHOH860
AHOH931
AHOH954
ASER1
AGLU2
ALEU3
AHIS4
AGLN7

site_idAC3
Number of Residues15
Detailsbinding site for residue ALF A 703
ChainResidue
ATHR26
AGLY27
ALYS30
AGLU132
AALA168
AGLY442
AARG469
AARG471
AADP702
AMG704
AHOH805
AHOH814
AHOH832
AHOH931
AHOH958

site_idAC4
Number of Residues5
Detailsbinding site for residue MG A 704
ChainResidue
AADP702
AALF703
AHOH814
AHOH835
AHOH931

site_idAC5
Number of Residues5
Detailsbinding site for residue SO4 A 705
ChainResidue
AHIS4
AGLY5
ATYR6
AGLN307
AARG332

site_idAC6
Number of Residues5
Detailsbinding site for residue SO4 A 706
ChainResidue
APHE178
AARG503
ASER539
AARG542
AGLN543

site_idAC7
Number of Residues4
Detailsbinding site for residue SO4 A 707
ChainResidue
ATHR414
AASN416
ALYS644
AHOH842

site_idAC8
Number of Residues5
Detailsbinding site for residue SO4 A 708
ChainResidue
APHE273
ACYS274
AARG275
ALYS276
AHOH829

site_idAC9
Number of Residues10
Detailsbinding site for residue SO4 X 101
ChainResidue
ALYS56
AHIS135
AHOH885
XG20
XC21
XHOH212
XHOH217
XHOH228
XHOH232
XHOH238

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon