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5IJ9

Cryo EM density of microtubule assembled from human TUBB3-D417H mutant

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Tubulin alpha-1B chainpolymer43748665.01UniProt (P68363)
Pfam (PF00091)
Pfam (PF03953)
Homo sapiens (Human)Alpha-tubulin ubiquitous,Tubulin K-alpha-1,Tubulin alpha-ubiquitous chain
2B
(B)
Tubulin beta-3 chainpolymer42647833.01UniProt (Q13509)
Pfam (PF00091)
Pfam (PF03953)
Homo sapiens (Human)Tubulin beta-4 chain,Tubulin beta-III
3C
(A)
GUANOSINE-5'-TRIPHOSPHATEnon-polymer523.21Chemie (GTP)
PubChem (177679032)
PubChem (135400627)
PubChem (135487750)
PubChem (136088935)
PubChem (136803486)
PubChem (135398633)
PubChem (135544356)
PubChem (135547949)
PubChem (135600366)
PubChem (135749822)
PubChem (136005188)
PubChem (136073923)
PubChem (136240914)
PubChem (136664747)
PubChem (136772743)
PubChem (136772744)
PubChem (136803487)
PubChem (137286749)
PubChem (164715984)
PubChem (171699466)
4D
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
PubChem (888)
5E
(B)
GUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
PubChem (136073927)
PubChem (135398619)
PubChem (135402030)
PubChem (135431654)
PubChem (135566337)
PubChem (135760556)
PubChem (136026707)
PubChem (136053418)
PubChem (136663964)
PubChem (136664748)
PubChem (136759848)
PubChem (136759849)
PubChem (136759850)
PubChem (136836636)
PubChem (136847074)
PubChem (172898537)
Sequence modifications
B: 1 - 426 (UniProt: Q13509)
PDBExternal DatabaseDetails
His 417Asp 417engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight96498.0
Non-Polymers*Number of molecules3
Total formula weight990.7
All*Total formula weight97488.7
*Water molecules are not included.

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PDB entries from 2026-04-01

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