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5IFS

Quantitative interaction mapping reveals an extended ubiquitin regulatory domain in ASPL that disrupts functional p97 hexamers and induces cell death

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Tether containing UBX domain for GLUT4polymer23726451.42UniProt (Q9BZE9)
Pfam (PF00789)
Homo sapiens (Human)Alveolar soft part sarcoma chromosomal region candidate gene 1 protein,Alveolar soft part sarcoma locus,Renal papillary cell carcinoma protein 17,UBX domain-containing protein 9
2B, D
(B, D)
Transitional endoplasmic reticulum ATPasepolymer48153508.22UniProt (P55072)
Pfam (PF02359)
Pfam (PF02933)
Pfam (PF00004)
Pfam (PF17862)
Homo sapiens (Human)TER ATPase,15S Mg(2+)-ATPase p97 subunit,Valosin-containing protein,VCP
3E, K
(B, D)
ADENOSINE-5'-DIPHOSPHATEnon-polymer427.22Chemie (ADP)
4F, L
(B, D)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
5G
(B)
SULFATE IONnon-polymer96.11Chemie (SO4)
6H, I, M
(B, D)
1,2-ETHANEDIOLnon-polymer62.13Chemie (EDO)
7J
(B)
GLYCEROLnon-polymer92.11Chemie (GOL)
8N, O, P, Q
(A, B, C, D)
waterwater18.0408Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight159919.0
Non-Polymers*Number of molecules9
Total formula weight1277.4
All*Total formula weight161196.4
*Water molecules are not included.

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PDB entries from 2025-07-16

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