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5I2K

Structure of the human GluN1/GluN2A LBD in complex with 7-{[ethyl(4-fluorophenyl)amino]methyl}-N,2-dimethyl-5-oxo-5H-[1,3]thiazolo[3,2-a]pyrimidine-3-carboxamide (compound 19)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Glutamate receptor ionotropic, NMDA 2Apolymer28531883.41UniProt (Q12879)
Pfam (PF10613)
Pfam (PF00060)
Homo sapiens (Human)GluN2A, Glutamate [NMDA] receptor subunit epsilon-1, N-methyl D-aspartate receptor subtype 2A, hNR2A
2B
(B)
Glutamate receptor ionotropic, NMDA 1polymer29333409.11UniProt (Q05586)
Pfam (PF10613)
Pfam (PF00060)
Homo sapiens (Human)GluN1, Glutamate [NMDA] receptor subunit zeta-1,N-methyl-D-aspartate receptor subunit NR1, NMD-R1
3C
(A)
GLUTAMIC ACIDnon-polymer147.11Chemie (GLU)
4D
(B)
GLYCINEnon-polymer75.11Chemie (GLY)
5E
(B)
7-{[ethyl(4-fluorophenyl)amino]methyl}-N,2-dimethyl-5-oxo-5H-[1,3]thiazolo[3,2-a]pyrimidine-3-carboxamidenon-polymer374.41Chemie (67H)
6F, G
(A, B)
waterwater18.055Chemie (HOH)
Sequence modifications
A: 3 - 141 (UniProt: Q12879)
PDBExternal DatabaseDetails
Gly 1-expression tag
Ser 2-expression tag
A: 144 - 285 (UniProt: Q12879)
PDBExternal DatabaseDetails
Gly 142-linker
Thr 143-linker
B: 3 - 153 (UniProt: Q05586)
PDBExternal DatabaseDetails
Gly 1-expression tag
Ser 2-expression tag
B: 156 - 293 (UniProt: Q05586)
PDBExternal DatabaseDetails
Gly 154-linker
Thr 155-linker
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight65292.5
Non-Polymers*Number of molecules3
Total formula weight596.6
All*Total formula weight65889.1
*Water molecules are not included.

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PDB entries from 2025-06-11

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