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5I08

Prefusion structure of a human coronavirus spike protein

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Spike glycoprotein,Foldon chimerapolymer1299144295.93UniProt (Q0ZME7)
UniProt (P10104)
Pfam (PF16451)
Pfam (PF09408)
Pfam (PF19209)
Pfam (PF01601)
Pfam (PF07921)
UniProt (by SIFTS) (M1E1E4)
Human coronavirus HKU1 (isolate N5) (HCoV-HKU1)HKU1 prefusion spike protein, S glycoprotein, E2, Peplomer protein,Fibritin, Collar protein,Whisker antigen control protein
Sequence modifications
A, B, C: 14 - 1276 (UniProt: Q0ZME7)
PDBExternal DatabaseDetails
Gly 752Arg 752engineered mutation
Gly 753Arg 753engineered mutation
Ser 754Lys 754engineered mutation
Gly 755Arg 755engineered mutation
Ser 756Arg 756engineered mutation
Gly 1277-linker
Ser 1278-linker
A, B, C: 1279 - 1305 (UniProt: P10104)
PDBExternal DatabaseDetails
Leu 1300Phe 479conflict
Gly 1306-expression tag
Leu 1307-expression tag
Glu 1308-expression tag
Val 1309-expression tag
Leu 1310-expression tag
Phe 1311-expression tag
Gln 1312-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight432887.7
All*Total formula weight432887.7
*Water molecules are not included.

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PDB entries from 2025-07-16

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