5I08
Prefusion structure of a human coronavirus spike protein
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | Spike glycoprotein,Foldon chimera | polymer | 1299 | 144295.9 | 3 | UniProt (Q0ZME7) UniProt (P10104) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) Pfam (PF07921) UniProt (by SIFTS) (M1E1E4) In PDB | Human coronavirus HKU1 (isolate N5) (HCoV-HKU1) | HKU1 prefusion spike protein, S glycoprotein, E2, Peplomer protein,Fibritin, Collar protein,Whisker antigen control protein |
Sequence modifications
A, B, C: 14 - 1276 (UniProt: Q0ZME7)
A, B, C: 1279 - 1305 (UniProt: P10104)
PDB | External Database | Details |
---|---|---|
Gly 752 | Arg 752 | engineered mutation |
Gly 753 | Arg 753 | engineered mutation |
Ser 754 | Lys 754 | engineered mutation |
Gly 755 | Arg 755 | engineered mutation |
Ser 756 | Arg 756 | engineered mutation |
Gly 1277 | - | linker |
Ser 1278 | - | linker |
PDB | External Database | Details |
---|---|---|
Leu 1300 | Phe 479 | conflict |
Gly 1306 | - | expression tag |
Leu 1307 | - | expression tag |
Glu 1308 | - | expression tag |
Val 1309 | - | expression tag |
Leu 1310 | - | expression tag |
Phe 1311 | - | expression tag |
Gln 1312 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 432887.7 | |
All* | Total formula weight | 432887.7 |