5HJ3
Crystal structure of host-primed Ebola virus GP, GPcl.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | C, G, K, O | Envelope glycoprotein | polymer | 179 | 19604.2 | 4 | UniProt (Q05320) Pfam (PF01611) In PDB | Ebola virus sp. | GP1,2,GP |
2 | D, H, L, P | Envelope glycoprotein | polymer | 136 | 15335.4 | 4 | UniProt (P87666) Pfam (PF22307) In PDB | Zaire ebolavirus (ZEBOV) | GP1,2,GP |
3 | E, I, M, A | KZ52 Antibody Fragment | polymer | 226 | 24021.0 | 4 | Homo sapiens (Human) | ||
4 | F, J, N, B | KZ52 Antibody Fragment | polymer | 217 | 23896.6 | 4 | Homo sapiens (Human) | ||
5 | Q, R, S, T | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1235.1 | 4 | In PDB GlyTouCan (G23799GS) |
Sequence modifications
C, G, K, O: 32 - 194 (UniProt: Q05320)
PDB | External Database | Details |
---|---|---|
Tyr 16 | - | expression tag |
Pro 17 | - | expression tag |
Tyr 18 | - | expression tag |
Asp 19 | - | expression tag |
Val 20 | - | expression tag |
Pro 21 | - | expression tag |
Asp 22 | - | expression tag |
Tyr 23 | - | expression tag |
Ala 24 | - | expression tag |
Ile 25 | - | expression tag |
Glu 26 | - | expression tag |
Gly 27 | - | expression tag |
Arg 28 | - | expression tag |
Gly 29 | - | expression tag |
Ala 30 | - | expression tag |
Arg 31 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 16 |
Total formula weight | 331428.3 | |
Branched | Number of molecules | 4 |
Total formula weight | 4940.4 | |
All* | Total formula weight | 336368.7 |