5FER
Complex of TRIM25 RING with UbcH5-Ub
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, D | E3 ubiquitin/ISG15 ligase TRIM25 | polymer | 85 | 9276.7 | 2 | UniProt (Q14258) Pfam (PF13445) In PDB | Homo sapiens (Human) | Estrogen-responsive finger protein,RING finger protein 147,RING-type E3 ubiquitin transferase,Tripartite motif-containing protein 25,Ubiquitin/ISG15-conjugating enzyme TRIM25,Zinc finger protein 147 |
2 | B, E | Ubiquitin-conjugating enzyme E2 D1 | polymer | 150 | 16929.4 | 2 | UniProt (P51668) Pfam (PF00179) In PDB | Homo sapiens (Human) | (E3-independent) E2 ubiquitin-conjugating enzyme D1,E2 ubiquitin-conjugating enzyme D1,Stimulator of Fe transport,SFT,UBC4/5 homolog,UbcH5,Ubiquitin carrier protein D1,Ubiquitin-conjugating enzyme E2(17)KB 1,Ubiquitin-conjugating enzyme E2-17 kDa 1,Ubiquitin-protein ligase D1 |
3 | C, F | Ubiquitin-40S ribosomal protein S27a | polymer | 76 | 8576.8 | 2 | UniProt (P62992) Pfam (PF00240) In PDB | Bos taurus (Bovine) | Ubiquitin carboxyl extension protein 80 |
4 | A, D | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
5 | water | water | 18.0 | 68 | Chemie (HOH) |
Sequence modifications
A, D: 1 - 82 (UniProt: Q14258)
B, E: 1 - 147 (UniProt: P51668)
PDB | External Database | Details |
---|---|---|
Gly -2 | - | expression tag |
Pro -1 | - | expression tag |
Gly 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -2 | - | expression tag |
Pro -1 | - | expression tag |
Gly 0 | - | expression tag |
Arg 22 | Ser 22 | engineered mutation |
Lys 85 | Cys 85 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 69565.7 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 261.6 | |
All* | Total formula weight | 69827.4 |