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5EM2

Crystal structure of the Erb1-Ytm1 complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Ribosome biogenesis protein ERB1polymer38843174.32UniProt (G0SCK6)
Pfam (PF00400)
Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)Eukaryotic ribosome biogenesis protein 1
2B, D
(B, D)
Ribosome biogenesis protein YTM1polymer49953326.62UniProt (G0SFB5)
Pfam (PF08154)
Pfam (PF00400)
Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
3E, F, G, H, I...
(A, C, D)
1,2-ETHANEDIOLnon-polymer62.111Chemie (EDO)
4K
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
5Q, R, S, T
(A, B, C, D)
waterwater18.0183Chemie (HOH)
Sequence modifications
A, C: 423 - 801 (UniProt: G0SCK6)
PDBExternal DatabaseDetails
Met 414-initiating methionine
Ala 415-expression tag
His 416-expression tag
His 417-expression tag
His 418-expression tag
His 419-expression tag
His 420-expression tag
His 421-expression tag
Met 422-expression tag
B, D: 1 - 495 (UniProt: G0SFB5)
PDBExternal DatabaseDetails
Gly -3-expression tag
Gly -2-expression tag
Ala -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight193001.9
Non-Polymers*Number of molecules12
Total formula weight707.1
All*Total formula weight193708.9
*Water molecules are not included.

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PDB entries from 2025-04-16

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