5EM2
Crystal structure of the Erb1-Ytm1 complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C (A, C) | Ribosome biogenesis protein ERB1 | polymer | 388 | 43174.3 | 2 | UniProt (G0SCK6) Pfam (PF00400) | Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) | Eukaryotic ribosome biogenesis protein 1 |
2 | B, D (B, D) | Ribosome biogenesis protein YTM1 | polymer | 499 | 53326.6 | 2 | UniProt (G0SFB5) Pfam (PF08154) Pfam (PF00400) | Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) | |
3 | E, F, G, H, I... (A, C, D) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 11 | Chemie (EDO) | |||
4 | K (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
5 | Q, R, S, T (A, B, C, D) | water | water | 18.0 | 183 | Chemie (HOH) |
Sequence modifications
A, C: 423 - 801 (UniProt: G0SCK6)
B, D: 1 - 495 (UniProt: G0SFB5)
PDB | External Database | Details |
---|---|---|
Met 414 | - | initiating methionine |
Ala 415 | - | expression tag |
His 416 | - | expression tag |
His 417 | - | expression tag |
His 418 | - | expression tag |
His 419 | - | expression tag |
His 420 | - | expression tag |
His 421 | - | expression tag |
Met 422 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Gly -2 | - | expression tag |
Ala -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 193001.9 | |
Non-Polymers* | Number of molecules | 12 |
Total formula weight | 707.1 | |
All* | Total formula weight | 193708.9 |