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5EDW

Ternary structure of Dpo4 bound to G in the template base paired with incoming dTTP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase IVpolymer34139019.51UniProt (Q97W02)
Pfam (PF00817)
Pfam (PF11798)
Pfam (PF11799)
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)Pol IV
2B
(T)
DNA (5'-D(*CP*TP*AP*AP*CP*GP*GP*GP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3')polymer195701.71Sulfolobus solfataricus P2
3C
(P)
DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3')polymer134096.71Sulfolobus solfataricus P2
4D, E, F
(A)
CALCIUM IONnon-polymer40.13Chemie (CA)
5G
(A)
THYMIDINE-5'-TRIPHOSPHATEnon-polymer482.21Chemie (TTP)
6H, I, J
(A, T, P)
waterwater18.045Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight48817.9
Non-Polymers*Number of molecules4
Total formula weight602.4
All*Total formula weight49420.3
*Water molecules are not included.

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PDB entries from 2026-01-14

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