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5EDW

Ternary structure of Dpo4 bound to G in the template base paired with incoming dTTP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003677molecular_functionDNA binding
A0003684molecular_functiondamaged DNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005737cellular_componentcytoplasm
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006281biological_processDNA repair
A0006974biological_processDNA damage response
A0042276biological_processerror-prone translesion synthesis
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue CA A 401
ChainResidue
AASP7
APHE8
AASP105
ALYS159
ACA402
ATTP404

site_idAC2
Number of Residues4
Detailsbinding site for residue CA A 402
ChainResidue
ATTP404
AASP7
AGLU106
ACA401

site_idAC3
Number of Residues4
Detailsbinding site for residue CA A 403
ChainResidue
AALA181
AILE186
AHOH516
AHOH530

site_idAC4
Number of Residues17
Detailsbinding site for residue TTP A 404
ChainResidue
APHE8
AASP9
ATYR10
APHE11
ATYR12
AALA44
ATHR45
ATYR48
AARG51
AALA57
AASP105
ALYS159
ACA401
ACA402
AHOH510
PDC13
TDG6

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE:
ChainResidueDetails
AGLU106

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING:
ChainResidueDetails
AASP7
AASP105

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Substrate discrimination
ChainResidueDetails
ATYR12

224931

PDB entries from 2024-09-11

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