Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5EBB

Structure of human sphingomyelinase phosphodiesterase like 3A (SMPDL3A) with Zn2+

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Acid sphingomyelinase-like phosphodiesterase 3apolymer41046611.43UniProt (Q92484)
Pfam (PF00149)
Pfam (PF19272)
Homo sapiens (Human)ASM-like phosphodiesterase 3a
2D, E, J, K, Q...
(A, B, C)
ZINC IONnon-polymer65.46Chemie (ZN)
3F, G, H, L, M...
(A, B, C)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.29Chemie (NAG)
4I, O, V
(A, B, C)
MALONATE IONnon-polymer102.03Chemie (MLI)
5P, W
(B, C)
GLYCEROLnon-polymer92.12Chemie (GOL)
6X, Y, Z
(A, B, C)
waterwater18.0301Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight139834.2
Non-Polymers*Number of molecules20
Total formula weight2873.7
All*Total formula weight142707.9
*Water molecules are not included.

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon