5E5A
Crystal structure of the chromatin-tethering domain of Human cytomegalovirus IE1 protein bound to the nucleosome core particle
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | I, J | DNA (146-MER) | polymer | 146 | 45054.8 | 2 | Homo sapiens (Humam) | ||
2 | A, E | Histone H3.2 | polymer | 136 | 15435.1 | 2 | UniProt (P84233) Pfam (PF00125) In PDB | Xenopus laevis (African clawed frog) | |
3 | B, F | Histone H4 | polymer | 103 | 11394.4 | 2 | UniProt (P62799) Pfam (PF15511) In PDB | Xenopus laevis (African clawed frog) | |
4 | C, G | Histone H2A | polymer | 130 | 14109.4 | 2 | UniProt (Q6AZJ8) Pfam (PF00125) Pfam (PF16211) UniProt (by SIFTS) (P06897) In PDB | Xenopus laevis (African clawed frog) | |
5 | D, H | Histone H2B 1.1 | polymer | 123 | 13655.9 | 2 | UniProt (P02281) Pfam (PF00125) In PDB | Xenopus laevis (African clawed frog) | H2B1.1 |
6 | K | C-terminal domain of Regulatory protein IE1 | polymer | 16 | 1703.9 | 1 | UniProt (Q6SWP6) UniProt (by SIFTS) (P03169) In PDB | Human herpesvirus 5 strain Towne | |
7 | I, C, D, E | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
8 | water | water | 18.0 | 230 | Chemie (HOH) |
Sequence modifications
A, E: 0 - 135 (UniProt: P84233)
D, H: 1 - 122 (UniProt: P02281)
PDB | External Database | Details |
---|---|---|
Ala 102 | Gly 103 | conflict |
PDB | External Database | Details |
---|---|---|
Met 0 | - | expression tag |
Thr 29 | Ser 33 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 11 |
Total formula weight | 201003.5 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 97.2 | |
All* | Total formula weight | 201100.7 |