5E3R
Crystal structure of DapD in complex with 2-aminopimelate from Corynebacterium glutamicum
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase | polymer | 302 | 31909.8 | 1 | UniProt (Q8NRE3) Pfam (PF14789) Pfam (PF14602) | Corynebacterium glutamicum | Tetrahydrodipicolinate N-succinyltransferase,THP succinyltransferase,Tetrahydropicolinate succinylase |
| 2 | B (A) | (2S)-2-aminoheptanedioic acid | non-polymer | 175.2 | 1 | Chemie (NPI) | |||
| 3 | C (A) | water | water | 18.0 | 140 | Chemie (HOH) |
Sequence modifications
A: 2 - 297 (UniProt: Q8NRE3)
| PDB | External Database | Details |
|---|---|---|
| Ile 57 | Thr 57 | conflict |
| His 298 | - | expression tag |
| His 299 | - | expression tag |
| His 300 | - | expression tag |
| His 301 | - | expression tag |
| His 302 | - | expression tag |
| His 303 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 31909.8 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 175.2 | |
| All* | Total formula weight | 32085.0 |
