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5DNN

Nucleosome core particle containing adducts of gold(I)-triethylphosphane and ruthenium(II)-toluene PTA complexes

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, EHistone H3.2polymer13515303.92UniProt (P84233)
Pfam (PF00125)
In PDB
Xenopus laevis (African clawed frog)
2B, FHistone H4polymer10211263.22UniProt (P62799)
Pfam (PF15511)
In PDB
Xenopus laevis (African clawed frog)
3C, GHistone H2Apolymer12813907.22UniProt (Q6AZJ8)
Pfam (PF00125)
Pfam (PF16211)
UniProt (by SIFTS) (P06897)
In PDB
Xenopus laevis (African clawed frog)
4D, HHistone H2B 1.1polymer12513848.12UniProt (P02281)
Pfam (PF00125)
In PDB
Xenopus laevis (African clawed frog)H2B1.1
5IDNA (145-MER)polymer14544749.71synthetic construct
6JDNA (145-MER)polymer14544740.61synthetic construct
7A, Etriethylphosphanuidylgold(1+)non-polymer315.12Chemie (AUF)
8C, G, HSULFATE IONnon-polymer96.13Chemie (SO4)
9EMAGNESIUM IONnon-polymer24.31Chemie (MG)
10G, Hdichloro[(1,2,3,4,5,6-eta)-6-methylbenzene]1,3,5-triaza-7lambda~5~-phosphatricyclo[3.3.1.1~3,7~]dec-7-ylrutheniumnon-polymer421.32Chemie (RAX)
Sequence modifications
A, E: 1 - 135 (UniProt: P84233)
PDBExternal DatabaseDetails
Ala 102Gly 103variant
C, G: 1 - 128 (UniProt: Q6AZJ8)
PDBExternal DatabaseDetails
-Ala 127deletion
D, H: -2 - 122 (UniProt: P02281)
PDBExternal DatabaseDetails
Thr 29Ser 33variant
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight198135.2
Non-Polymers*Number of molecules8
Total formula weight1785.3
All*Total formula weight199920.4
*Water molecules are not included.

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PDB entries from 2024-04-24

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