5DNF
Crystal structure of CC chemokine 5 (CCL5) oligomer in complex with heparin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | C-C motif chemokine 5 | polymer | 65 | 7514.6 | 9 | UniProt (P13501) Pfam (PF00048) | Homo sapiens (Human) | EoCP,Eosinophil chemotactic cytokine,SIS-delta,Small-inducible cytokine A5,T cell-specific protein P228,TCP228,T-cell-specific protein RANTES |
| 2 | J, K, L (J, K, L) | 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose | branched | 916.8 | 3 | In PDB GlyTouCan (G66470SO) | |||
| 3 | AA, GA, M, PA, U... (D, F, A, H, C...) | alpha-D-galactopyranose | non-polymer | 180.2 | 6 | Chemie (GLA) | |||
| 4 | DA, LA, N, QA, V (E, G, A, H, C) | beta-D-glucopyranose | non-polymer | 180.2 | 5 | Chemie (BGC) | |||
| 5 | EA, HA, MA, O, RA (E, F, G, A, H) | SULFATE ION | non-polymer | 96.1 | 5 | Chemie (SO4) | |||
| 6 | BA, CA, FA, IA, JA... (D, E, F, G, A...) | CHLORIDE ION | non-polymer | 35.5 | 20 | Chemie (CL) | |||
| 7 | T (B) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 122.1 | 1 | Chemie (TRS) | |||
| 8 | AB, BB, CB, DB, EB... (D, E, F, G, H...) | water | water | 18.0 | 210 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 67631.8 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 2750.3 | |
| Non-Polymers* | Number of molecules | 37 |
| Total formula weight | 3293.2 | |
| All* | Total formula weight | 73675.3 |
