5DMK
Crystal Structure of IAg7 in complex with RLGL-WE14
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G (A, C, E, G) | H-2 class II histocompatibility antigen, A-D alpha chain | polymer | 173 | 19659.9 | 4 | UniProt (P04228) Pfam (PF00993) Pfam (PF07654) | Mus musculus | |
| 2 | B, D, F, H (B, D, F, H) | beta chain of Major Histocompatibility Complex Class II, I-Ag7,H2-Ab1 protein | polymer | 212 | 24925.0 | 4 | UniProt (Q31135) Pfam (PF00969) Pfam (PF07654) UniProt (by SIFTS) (P26339) | Mus musculus (Mouse) | MHC class II H2-IA-beta chain (haplotype NOD) |
| 3 | I, J (B, F) | CITRATE ANION | non-polymer | 189.1 | 2 | Chemie (FLC) | |||
| 4 | K, L, M, N, O... (A, B, C, D, E...) | water | water | 18.0 | 333 | Chemie (HOH) |
Sequence modifications
B, D, F, H: -27 - -4 (PDB: 5DMK)
B, D, F, H: 5 - 192 (UniProt: Q31135)
| PDB | External Database | Details |
|---|---|---|
| Leu -3 | - | linker |
| Val -2 | - | linker |
| Pro -1 | - | linker |
| Arg 0 | - | linker |
| Gly 1 | - | linker |
| Ser 2 | - | linker |
| Gly 3 | - | linker |
| Ser 4 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 178339.6 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 378.2 | |
| All* | Total formula weight | 178717.8 |
