5DMK

Crystal Structure of IAg7 in complex with RLGL-WE14

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0006955	biological_process	immune response
A	0016020	cellular_component	membrane
A	0019882	biological_process	antigen processing and presentation
A	0042613	cellular_component	MHC class II protein complex
B	0006955	biological_process	immune response
B	0016020	cellular_component	membrane
B	0019882	biological_process	antigen processing and presentation
B	0042613	cellular_component	MHC class II protein complex
C	0006955	biological_process	immune response
C	0016020	cellular_component	membrane
C	0019882	biological_process	antigen processing and presentation
C	0042613	cellular_component	MHC class II protein complex
D	0006955	biological_process	immune response
D	0016020	cellular_component	membrane
D	0019882	biological_process	antigen processing and presentation
D	0042613	cellular_component	MHC class II protein complex
E	0006955	biological_process	immune response
E	0016020	cellular_component	membrane
E	0019882	biological_process	antigen processing and presentation
E	0042613	cellular_component	MHC class II protein complex
F	0006955	biological_process	immune response
F	0016020	cellular_component	membrane
F	0019882	biological_process	antigen processing and presentation
F	0042613	cellular_component	MHC class II protein complex
G	0006955	biological_process	immune response
G	0016020	cellular_component	membrane
G	0019882	biological_process	antigen processing and presentation
G	0042613	cellular_component	MHC class II protein complex
H	0006955	biological_process	immune response
H	0016020	cellular_component	membrane
H	0019882	biological_process	antigen processing and presentation
H	0042613	cellular_component	MHC class II protein complex

Functional Information from PDB Data

site_id	AC1
Number of Residues	8
Details	binding site for residue FLC B 301

Chain	Residue
B	ARG-20
B	TRP-22
B	ARG71
B	HOH401
H	ARG-20
H	TRP-22
H	ARG71
H	HOH308

---

site_id	AC2
Number of Residues	7
Details	binding site for residue FLC F 301

Chain	Residue
D	ARG-20
D	ARG71
F	ARG-20
F	TRP-22
F	ARG71
F	HOH404
D	TRP-22

---

site_id	AC3
Number of Residues	5
Details	binding site for Di-peptide TRP H 191 and ARG H 192

Chain	Residue
H	ILE104
H	LEU106
H	LEU118
H	TYR174
H	GLU190

---

site_id	AC4
Number of Residues	5
Details	binding site for Di-peptide TRP H 191 and ARG H 192

Chain	Residue
H	ILE104
H	LEU106
H	LEU118
H	TYR174
H	GLU190

---

Functional Information from PROSITE/UniProt

site_id	PS00290
Number of Residues	7
Details	IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCHVEH

Chain	Residue	Details
B	TYR174-HIS180
A	TYR163-HIS169

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	4
Details	Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	12
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P10354","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	4
Details	Modified residue: {"description":"Methionine sulfoxide","evidences":[{"source":"UniProtKB","id":"P10645","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	8
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P05059","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	4
Details	Modified residue: {"description":"Pyrrolidone carboxylic acid","evidences":[{"source":"PubMed","id":"21537909","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	4
Details	Glycosylation: {"description":"O-linked (Xyl...) (chondroitin sulfate) serine","evidences":[{"source":"UniProtKB","id":"P10645","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---