5DKP
Crystal Structure of N. meningitidis ClpP in complex with agonist ADEP A54556.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, AA, B, BA, C... (A, B, C, D, E...) | ATP-dependent Clp protease proteolytic subunit | polymer | 206 | 22925.2 | 28 | UniProt (Q9JZ38) Pfam (PF00574) | Neisseria meningitidis serogroup B (strain MC58) | Endopeptidase Clp |
| 2 | AB, BB, CA, CB, DA... (O, P, Q, R, S...) | agonist ADEP A54556 | polymer | 7 | 736.9 | 28 | NOR (NOR01131) BIRD (PRD_000503) | ||
| 3 | AC, CC, DC, EB, EC... (h, i, j, A, k...) | POTASSIUM ION | non-polymer | 39.1 | 28 | Chemie (K) | |||
| 4 | BC, FC, VB (h, k, c) | SODIUM ION | non-polymer | 23.0 | 3 | Chemie (NA) | |||
| 5 | AD, BD, CD, DD, ED... (d, e, f, g, h...) | water | water | 18.0 | 854 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J, K, L, M, N, a, b, c, d, e, f, g, h, i, j, k, l, m, n: 1 - 204 (UniProt: Q9JZ38)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 56 |
| Total formula weight | 662536.6 | |
| Non-Polymers* | Number of molecules | 31 |
| Total formula weight | 1163.7 | |
| All* | Total formula weight | 663700.3 |
