5DKP
Crystal Structure of N. meningitidis ClpP in complex with agonist ADEP A54556.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 90 |
Detector technology | PIXEL |
Collection date | 2013-08-10 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 117.640, 198.850, 144.040 |
Unit cell angles | 90.00, 97.81, 90.00 |
Refinement procedure
Resolution | 42.400 - 2.381 |
R-factor | 0.1975 |
Rwork | 0.196 |
R-free | 0.23900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4u0g |
RMSD bond length | 0.009 |
RMSD bond angle | 1.289 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 142.700 | 2.590 |
High resolution limit [Å] | 2.380 | 2.390 |
Rmerge | 0.173 | |
Number of reflections | 259622 | |
<I/σ(I)> | 10.8 | |
Completeness [%] | 99.6 | 99.6 |
Redundancy | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 296 | 50 mM TRIS/HCl, pH 7.5, 200 mM KCl, 1 mM DTT, 10% glycerol |