5DK4
Crystal structure analysis of Tryptophanyl-trna synthetase from Bacillus stearothermophilus in complex with indolmycin and Mg*ATP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Tryptophan--tRNA ligase | polymer | 329 | 37751.7 | 1 | UniProt (P00953) Pfam (PF00579) In PDB | Geobacillus stearothermophilus | Tryptophanyl-tRNA synthetase,TrpRS |
| 2 | A | ADENOSINE-5'-TRIPHOSPHATE | non-polymer | 507.2 | 1 | Chemie (ATP) | |||
| 3 | A | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 4 | A | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 5 | A | (5S)-5-[(1R)-1-(1H-indol-3-yl)ethyl]-2-(methylamino)-1,3-oxazol-4(5H)-one | non-polymer | 257.3 | 1 | Chemie (5BX) | |||
| 6 | water | water | 18.0 | 250 | Chemie (HOH) |
Sequence modifications
A: 2 - 328 (UniProt: P00953)
| PDB | External Database | Details |
|---|---|---|
| Gly 0 | - | expression tag |
| Mse 1 | - | expression tag |
| Leu 64 | Lys 64 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 37751.7 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 880.9 | |
| All* | Total formula weight | 38632.5 |
