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5DB3

Menin in complex with MI-574

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Meninpolymer48954570.21UniProt (O00255)
Pfam (PF05053)
Homo sapiens (Human)
2B, H, I
(A)
DIMETHYL SULFOXIDEnon-polymer78.13Chemie (DMS)
3C, L
(A)
TETRAETHYLENE GLYCOLnon-polymer194.22Chemie (PG4)
4D, E, F, G
(A)
SULFATE IONnon-polymer96.14Chemie (SO4)
5J
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
6K
(A)
6-methoxy-4-methyl-1-(1H-pyrazol-4-ylmethyl)-5-[(4-{[6-(2,2,2-trifluoroethyl)thieno[2,3-d]pyrimidin-4-yl]amino}piperidin-1-yl)methyl]-1H-indole-2-carbonitrilenon-polymer594.71Chemie (58Q)
7M
(A)
waterwater18.0399Chemie (HOH)
Sequence modifications
A: 1 - 459 (UniProt: O00255)
PDBExternal DatabaseDetails
Gly -4-expression tag
Gly -3-expression tag
Ser -2-expression tag
Ser -1-expression tag
Ser 0-expression tag
-Ile 54deletion
-Pro 55deletion
-Thr 56deletion
-Asn 57deletion
-Val 58deletion
-Pro 59deletion
-Glu 60deletion
-Leu 61deletion
-Thr 62deletion
-Phe 63deletion
-Gln 64deletion
-Pro 65deletion
-Ser 66deletion
-Pro 67deletion
-Ala 68deletion
-Pro 69deletion
-Asp 70deletion
-Pro 71deletion
-Pro 72deletion
-Gly 73deletion
-Glu 387deletion
-Glu 388deletion
-Arg 389deletion
-Pro 390deletion
-Gly 391deletion
-Glu 392deletion
-Gln 393deletion
-Ser 394deletion
-Gln 395deletion
-Gly 396deletion
-Thr 397deletion
-Gln 398deletion
A: 537 - 593 (UniProt: O00255)
PDBExternal DatabaseDetails
Ala 541Thr 541engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight54570.2
Non-Polymers*Number of molecules11
Total formula weight1707.9
All*Total formula weight56278.1
*Water molecules are not included.

238268

PDB entries from 2025-07-02

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