Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5CP6

Nucleosome Core Particle with Adducts from the Anticancer Compound, [(eta6-5,8,9,10-tetrahydroanthracene)Ru(ethylenediamine)Cl][PF6]

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1IDNA (145-MER)polymer14544749.71synthetic construct
2JDNA (145-MER)polymer14544740.61synthetic construct
3A, EHistone H3.2polymer13515303.92UniProt (P84233)
Pfam (PF00125)
In PDB
Xenopus laevis (African clawed frog)
4B, FHistone H4polymer10211263.22UniProt (P62799)
Pfam (PF15511)
In PDB
Xenopus laevis (African clawed frog)
5C, GHistone H2Apolymer12813907.22UniProt (Q6AZJ8)
Pfam (PF00125)
Pfam (PF16211)
UniProt (by SIFTS) (P06897)
In PDB
Xenopus laevis (African clawed frog)
6D, HHistone H2B 1.1polymer12513848.12UniProt (P02281)
Pfam (PF00125)
In PDB
Xenopus laevis (African clawed frog)H2B1.1
7I, J(ethane6-5,8,9,10-tetrahydroanthracene)Ru(II)(ethylene-diamine)Clnon-polymer378.93Chemie (RUH)
8D, G, HSULFATE IONnon-polymer96.13Chemie (SO4)
9EMAGNESIUM IONnon-polymer24.31Chemie (MG)
10waterwater18.035Chemie (HOH)
Sequence modifications
A, E: 1 - 135 (UniProt: P84233)
PDBExternal DatabaseDetails
Ala 102Gly 103variant
C, G: 1 - 128 (UniProt: Q6AZJ8)
PDBExternal DatabaseDetails
-Ala 127deletion
D, H: -2 - 122 (UniProt: P02281)
PDBExternal DatabaseDetails
Thr 29Ser 33variant
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight198135.2
Non-Polymers*Number of molecules7
Total formula weight1449.1
All*Total formula weight199584.3
*Water molecules are not included.

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon