5C0Y
Crystal structure of the Rrp6 catalytic domain bound to poly(U) RNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Exosome complex exonuclease RRP6 | polymer | 402 | 47072.4 | 2 | UniProt (Q12149) Pfam (PF01612) Pfam (PF00570) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Ribosomal RNA-processing protein 6 |
| 2 | C, D (D, C) | poly U RNA | polymer | 15 | 4547.5 | 2 | synthetic construct | ||
| 3 | E (B) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 4 | F, G, H, I (A, B, D, C) | water | water | 18.0 | 588 | Chemie (HOH) |
Sequence modifications
A, B: 122 - 518 (UniProt: Q12149)
| PDB | External Database | Details |
|---|---|---|
| Gly 117 | - | expression tag |
| Pro 118 | - | expression tag |
| Asp 119 | - | expression tag |
| Ser 120 | - | expression tag |
| Met 121 | - | expression tag |
| Asn 296 | Asp 296 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 103239.9 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 24.3 | |
| All* | Total formula weight | 103264.2 |
