4YIV
Crystal structure of engineered TgAMA1 lacking the DII loop
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Apical membrane antigen AMA1 | polymer | 419 | 46064.3 | 1 | UniProt (S8GKS3) Pfam (PF02430) In PDB | Toxoplasma gondii ME49 | |
2 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
3 | A | CADMIUM ION | non-polymer | 112.4 | 2 | Chemie (CD) | |||
4 | A | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
5 | A | COBALT (II) ION | non-polymer | 58.9 | 3 | Chemie (CO) | |||
6 | A | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
7 | water | water | 18.0 | 233 | Chemie (HOH) |
Sequence modifications
A: 64 - 484 (UniProt: S8GKS3)
PDB | External Database | Details |
---|---|---|
Gly 59 | - | expression tag |
Ser 60 | - | expression tag |
Ala 61 | - | expression tag |
Met 62 | - | expression tag |
Gly 63 | - | expression tag |
- | His 340 | deletion |
- | Thr 341 | deletion |
- | Tyr 342 | deletion |
- | Pro 343 | deletion |
- | Leu 344 | deletion |
- | Thr 345 | deletion |
- | Ser 346 | deletion |
- | Gln 347 | deletion |
- | Ala 348 | deletion |
- | Ser 349 | deletion |
- | Trp 350 | deletion |
- | Asn 351 | deletion |
- | Asp 352 | deletion |
Gly 340 | Trp 353 | linker |
Ser 354 | Trp 354 | linker |
Gly 355 | Pro 355 | linker |
Ser 356 | Leu 356 | linker |
Gly 357 | His 357 | linker |
Ser 358 | Gln 358 | linker |
Gly 359 | Ser 359 | linker |
Ala 485 | - | expression tag |
Ala 486 | - | expression tag |
Leu 487 | - | expression tag |
Val 488 | - | expression tag |
Pro 489 | - | expression tag |
Arg 490 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 46064.3 | |
Non-Polymers* | Number of molecules | 10 |
Total formula weight | 877.9 | |
All* | Total formula weight | 46942.2 |