4YBH
Crystal structure of the human RAGE ectodomain (VC1C2 fragment) in complex with human S100A6
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Advanced glycosylation end product-specific receptor | polymer | 304 | 32680.3 | 1 | UniProt (Q15109) Pfam (PF08205) Pfam (PF13927) In PDB | Homo sapiens (Human) | Receptor for advanced glycosylation end products |
2 | B | Protein S100-A6 | polymer | 92 | 10321.9 | 1 | UniProt (P06703) Pfam (PF01023) In PDB | Homo sapiens (Human) | Calcyclin,Growth factor-inducible protein 2A9,MLN 4,Prolactin receptor-associated protein,PRA,S100 calcium-binding protein A6 |
3 | A, B | ZINC ION | non-polymer | 65.4 | 7 | Chemie (ZN) | |||
4 | A, B | CHLORIDE ION | non-polymer | 35.5 | 5 | Chemie (CL) | |||
5 | A | ACETATE ION | non-polymer | 59.0 | 3 | Chemie (ACT) | |||
6 | B | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
7 | water | water | 18.0 | 208 | Chemie (HOH) |
Sequence modifications
A: 23 - 323 (UniProt: Q15109)
B: 1 - 90 (UniProt: P06703)
PDB | External Database | Details |
---|---|---|
Gly 20 | - | expression tag |
Ala 21 | - | expression tag |
Met 22 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -1 | - | expression tag |
Ala 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 43002.2 | |
Non-Polymers* | Number of molecules | 17 |
Total formula weight | 892.4 | |
All* | Total formula weight | 43894.6 |