4Y3O
Crystal structure of Ribosomal oxygenase NO66 in complex with substrate Rpl8 peptide and Ni(II) and cofactor N-oxalyglycine
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 | polymer | 466 | 52984.8 | 2 | UniProt (Q9H6W3) Pfam (PF08007) Pfam (PF21233) In PDB | Homo sapiens (Human) | 60S ribosomal protein L8 histidine hydroxylase,Histone lysine demethylase NO66,Myc-associated protein with JmjC domain,Nucleolar protein 66,hsNO66,Ribosomal oxygenase NO66,ROX |
2 | C, D | Rpl8 peptide | polymer | 11 | 1104.2 | 2 | UniProt (by SIFTS) (P62917) In PDB | Homo sapiens | |
3 | A, B | NICKEL (II) ION | non-polymer | 58.7 | 2 | Chemie (NI) | |||
4 | A, B | N-OXALYLGLYCINE | non-polymer | 147.1 | 2 | Chemie (OGA) | |||
5 | B | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
6 | B | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) | |||
7 | water | water | 18.0 | 563 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 108178.1 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 746.9 | |
All* | Total formula weight | 108925.0 |