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4Y3O

Crystal structure of Ribosomal oxygenase NO66 in complex with substrate Rpl8 peptide and Ni(II) and cofactor N-oxalyglycine

Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue NI A 701
ChainResidue
AHIS340
AASP342
AHIS405
AOGA702
AHOH836

site_idAC2
Number of Residues12
Detailsbinding site for residue OGA A 702
ChainResidue
ALYS355
AHIS405
AALA407
AHIS417
ATHR419
ANI701
AHOH836
AHOH919
ATYR328
APHE337
AHIS340
AASP342

site_idAC3
Number of Residues5
Detailsbinding site for residue NI B 701
ChainResidue
BHIS340
BASP342
BHIS405
BOGA702
BHOH1082

site_idAC4
Number of Residues14
Detailsbinding site for residue OGA B 702
ChainResidue
BTYR328
BPHE337
BHIS340
BASP342
BLYS355
BHIS405
BHIS417
BTHR419
BNI701
BHOH839
BHOH886
BHOH985
BHOH1063
BHOH1082

site_idAC5
Number of Residues6
Detailsbinding site for residue GOL B 703
ChainResidue
ATRP428
BPRO455
BPHE477
BLYS480
BHOH944
BHOH1032

site_idAC6
Number of Residues9
Detailsbinding site for residue GOL B 704
ChainResidue
AASP460
AHOH1020
BARG199
BASP553
BGLY554
BHOH849
BHOH900
BHOH1016
BHOH1020

site_idAC7
Number of Residues8
Detailsbinding site for residue GOL B 705
ChainResidue
APHE458
AMET459
BGLY320
BSER321
BASN426
BARG501
BPHE505
BHOH879

site_idAC8
Number of Residues1
Detailsbinding site for residue ACT B 706
ChainResidue
BPHE605

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: (3S)-3-hydroxyhistidine => ECO:0000269|PubMed:23103944
ChainResidueDetails
CHIS216
DHIS216
AHIS405
BHIS340
BASP342
BHIS405

227344

PDB entries from 2024-11-13

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