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4XDO

Crystal structure of human KDM4C catalytic domain with OGA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Lysine-specific demethylase 4Cpolymer33839406.02UniProt (Q9H3R0)
Pfam (PF02375)
Pfam (PF02373)
Homo sapiens (Human)Gene amplified in squamous cell carcinoma 1 protein,GASC-1 protein,JmjC domain-containing histone demethylation protein 3C,Jumonji domain-containing protein 2C
2C, I
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
3D, J
(A, B)
FE (III) IONnon-polymer55.82Chemie (FE)
4E, K
(A, B)
N-OXALYLGLYCINEnon-polymer147.12Chemie (OGA)
5F, H
(A)
TRIETHYLENE GLYCOLnon-polymer150.22Chemie (PGE)
6G
(A)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
7L
(B)
TETRAETHYLENE GLYCOLnon-polymer194.21Chemie (PG4)
8M, N
(A, B)
waterwater18.0377Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight78812.1
Non-Polymers*Number of molecules10
Total formula weight1093.3
All*Total formula weight79905.4
*Water molecules are not included.

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PDB entries from 2025-06-18

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