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4X6Z

Yeast 20S proteasome in complex with PR-VI modulator

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, O
(1, M)
Proteasome subunit beta type-6polymer24126905.12UniProt (P23724)
Pfam (PF00227)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Multicatalytic endopeptidase complex subunit C5,Proteasome component C5
2B, P
(2, N)
Proteasome subunit beta type-7polymer26629471.32UniProt (P30657)
Pfam (PF00227)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Macropain subunit PRE4,Multicatalytic endopeptidase complex subunit PRE4,Proteasome component PRE4,Proteinase YSCE subunit PRE4
3C, Q
(A, O)
Proteasome subunit alpha type-1polymer25228033.82UniProt (P21243)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Macropain subunit C7-alpha,Multicatalytic endopeptidase complex C7,Proteasome component C7-alpha,Proteasome component Y8,Proteinase YSCE subunit 7,SCL1 suppressor protein
4D, R
(B, P)
Proteasome subunit alpha type-2polymer25027191.82UniProt (P23639)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Macropain subunit Y7,Multicatalytic endopeptidase complex subunit Y7,Proteasome component Y7,Proteinase YSCE subunit 7
5E, S
(C, Q)
Proteasome subunit alpha type-3polymer25828748.22UniProt (P23638)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Macropain subunit Y13,Multicatalytic endopeptidase complex subunit Y13,Proteasome component Y13,Proteinase YSCE subunit 13
6F, T
(D, R)
Proteasome subunit alpha type-4polymer25428478.12UniProt (P40303)
Pfam (PF00227)
Pfam (PF10584)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Macropain subunit PRE6,Multicatalytic endopeptidase complex subunit PRE6,Proteasome component PRE6,Proteinase YSCE subunit PRE6
7G, U
(E, S)
Proteasome subunit alpha type-5polymer26028649.12UniProt (P32379)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Macropain subunit PUP2,Multicatalytic endopeptidase complex subunit PUP2,Proteasome component PUP2,Proteinase YSCE subunit PUP2
8H, V
(F, T)
Proteasome subunit alpha type-6polymer23425634.02UniProt (P40302)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Macropain subunit PRE5,Multicatalytic endopeptidase complex subunit PRE5,Proteasome component PRE5,Proteinase YSCE subunit PRE5
9I, W
(G, U)
Probable proteasome subunit alpha type-7polymer28831575.12UniProt (P21242)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Macropain subunit C1,Multicatalytic endopeptidase complex subunit C1,Proteasome component C1,Proteinase YSCE subunit 1
10J, X
(H, V)
Proteasome subunit beta type-1polymer21523573.62UniProt (P38624)
Pfam (PF00227)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Macropain subunit PRE3,Multicatalytic endopeptidase complex subunit PRE3,Proteasome component PRE3,Proteinase YSCE subunit PRE3
11K, Y
(I, W)
Proteasome subunit beta type-2polymer26128299.92UniProt (P25043)
Pfam (PF00227)
Pfam (PF12465)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Macropain subunit PUP1,Multicatalytic endopeptidase complex subunit PUP1,Proteasome component PUP1,Proteinase YSCE subunit PUP1
12L, Z
(J, X)
Proteasome subunit beta type-3polymer20522627.82UniProt (P25451)
Pfam (PF00227)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Macropain subunit PUP3,Multicatalytic endopeptidase complex subunit PUP3,Proteasome component PUP3
13AA, M
(K, Y)
Proteasome subunit beta type-4polymer19822545.72UniProt (P22141)
Pfam (PF00227)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Macropain subunit C11,Multicatalytic endopeptidase complex subunit C11,Proteasome component C11,Proteinase YSCE subunit 11
14BA, N
(L, Z)
Proteasome subunit beta type-5polymer28731670.52UniProt (P30656)
Pfam (PF00227)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Macropain subunit PRE2,Multicatalytic endopeptidase complex subunit PRE2,Proteasome component PRE2,Proteinase YSCE subunit PRE2
15CA, DA
(a, e)
synthetic peptide (polymer)polymer131673.02synthetic construct
16DC, DD, EA, HD, IA...
(M, T, 1, V, 2...)
(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.29Chemie (MPD)
17AB, AC, AD, AE, BB...
(F, L, S, Z, M...)
GLYCEROLnon-polymer92.138Chemie (GOL)
18BC, BD, BE, CC, CD...
(L, S, Z, F, T...)
MAGNESIUM IONnon-polymer24.356Chemie (MG)
19AF, BF, CF, DE, DF...
(V, W, X, 1, Y...)
waterwater18.0359Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains30
Total formula weight770154.1
Non-Polymers*Number of molecules103
Total formula weight5924.2
All*Total formula weight776078.4
*Water molecules are not included.

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PDB entries from 2025-06-11

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