4TY0
Crystal structure of Vibrio cholerae DncV cyclic AMP-GMP synthase in complex with linear intermediate 5' pppA(3',5')pG
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Cyclic AMP-GMP synthase | polymer | 413 | 46966.3 | 2 | UniProt (Q9KVG7) Pfam (PF21654) Pfam (PF21713) In PDB | Vibrio cholerae O1 biovar El Tor str. N16961 | c-AMP-GMP synthase,Dinucleotide cyclase DncV |
| 2 | A, B | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 3 | A, B | [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3-[[(2R,3S,4R,5R)-5-(2-azanyl-6-oxidanylidene-3H-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-4-oxidanyl-oxolan-2-yl]methoxy-[[oxidanyl(phosphonooxy)phosphoryl]methyl]phosphinic acid | non-polymer | 850.4 | 2 | Chemie (38V) | |||
| 4 | A | ACETATE ION | non-polymer | 59.0 | 3 | Chemie (ACT) | |||
| 5 | water | water | 18.0 | 530 | Chemie (HOH) |
Sequence modifications
A, B: 4 - 414 (UniProt: Q9KVG7)
| PDB | External Database | Details |
|---|---|---|
| Gly 2 | - | expression tag |
| Ser 3 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 93932.6 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1975.2 | |
| All* | Total formula weight | 95907.8 |
