4OT1
Structural Basis for the Recognition of Human Cytomegalovirus Glycoprotein B by the Neutralizing Human Antibody SM5-1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Envelope glycoprotein B | polymer | 129 | 14427.1 | 1 | UniProt (P13201) Pfam (PF17416) Pfam (PF17417) In PDB | Human Cytomegalovirus (HHV-5) | gB, Glycoprotein GP55 |
2 | H | SM5-1 Fab Heavy Chain | polymer | 234 | 24878.0 | 1 | Homo sapiens | ||
3 | L | SM5-1 Fab Light Chain | polymer | 215 | 22569.1 | 1 | Homo sapiens | ||
4 | A, H, L | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
5 | L | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | non-polymer | 238.3 | 1 | Chemie (EPE) | |||
6 | water | water | 18.0 | 248 | Chemie (HOH) |
Sequence modifications
A: 114 - 133 (UniProt: P13201)
A: 344 - 438 (UniProt: P13201)
PDB | External Database | Details |
---|---|---|
Gly 104 | - | EXPRESSION TAG |
Pro 105 | - | EXPRESSION TAG |
Leu 106 | - | EXPRESSION TAG |
Gly 107 | - | EXPRESSION TAG |
Ser 108 | - | EXPRESSION TAG |
Pro 109 | - | EXPRESSION TAG |
Glu 110 | - | EXPRESSION TAG |
Phe 111 | - | EXPRESSION TAG |
Thr 112 | - | EXPRESSION TAG |
Ser 113 | - | EXPRESSION TAG |
PDB | External Database | Details |
---|---|---|
Ala 201 | - | LINKER |
Gly 202 | - | LINKER |
Ser 203 | - | LINKER |
Gly 204 | - | LINKER |
Ala 397 | Ile 397 | ENGINEERED MUTATION |
Ala 398 | Asn 398 | ENGINEERED MUTATION |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 61874.2 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 424.5 | |
All* | Total formula weight | 62298.7 |