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4NUB

Crystal structure of Escherichia coli ribosomal oxygenase YcfD

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A50S ribosomal protein L16 arginine hydroxylasepolymer38444334.01UniProt (P27431)
Pfam (PF08007)
Pfam (PF20514)
In PDB
Escherichia coliRibosomal oxygenase YcfD, ROX
2AFE (III) IONnon-polymer55.81Chemie (FE)
3AGLYCEROLnon-polymer92.11Chemie (GOL)
4waterwater18.051Chemie (HOH)
Sequence modifications
A: 1 - 373 (UniProt: P27431)
PDBExternal DatabaseDetails
Ala 146Glu 146engineered mutation
Ala 147Lys 147engineered mutation
Ser 374-EXPRESSION TAG
Gly 375-EXPRESSION TAG
Arg 376-EXPRESSION TAG
Val 377-EXPRESSION TAG
Glu 378-EXPRESSION TAG
His 379-EXPRESSION TAG
His 380-EXPRESSION TAG
His 381-EXPRESSION TAG
His 382-EXPRESSION TAG
His 383-EXPRESSION TAG
His 384-EXPRESSION TAG
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight44334.0
Non-Polymers*Number of molecules2
Total formula weight147.9
All*Total formula weight44481.9
*Water molecules are not included.

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PDB entries from 2024-08-14

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