4NUB
Crystal structure of Escherichia coli ribosomal oxygenase YcfD
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 50S ribosomal protein L16 arginine hydroxylase | polymer | 384 | 44334.0 | 1 | UniProt (P27431) Pfam (PF08007) Pfam (PF20514) | Escherichia coli | Ribosomal oxygenase YcfD, ROX |
| 2 | B (A) | FE (III) ION | non-polymer | 55.8 | 1 | Chemie (FE) | |||
| 3 | C (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 4 | D (A) | water | water | 18.0 | 51 | Chemie (HOH) |
Sequence modifications
A: 1 - 373 (UniProt: P27431)
| PDB | External Database | Details |
|---|---|---|
| Ala 146 | Glu 146 | engineered mutation |
| Ala 147 | Lys 147 | engineered mutation |
| Ser 374 | - | expression tag |
| Gly 375 | - | expression tag |
| Arg 376 | - | expression tag |
| Val 377 | - | expression tag |
| Glu 378 | - | expression tag |
| His 379 | - | expression tag |
| His 380 | - | expression tag |
| His 381 | - | expression tag |
| His 382 | - | expression tag |
| His 383 | - | expression tag |
| His 384 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 44334.0 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 147.9 | |
| All* | Total formula weight | 44481.9 |
