4NUB

Crystal structure of Escherichia coli ribosomal oxygenase YcfD

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005515	molecular_function	protein binding
A	0008198	molecular_function	ferrous iron binding
A	0016706	molecular_function	2-oxoglutarate-dependent dioxygenase activity
A	0042803	molecular_function	protein homodimerization activity
A	0043687	biological_process	post-translational protein modification
A	0046872	molecular_function	metal ion binding
A	0051213	molecular_function	dioxygenase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE FE A 401

Chain	Residue
A	HIS125
A	ASP127
A	HIS187
A	HOH508
A	HOH513

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site_id	AC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL A 402

Chain	Residue
A	GLU301
A	GLU372
A	LEU7
A	ASN8
A	PHE12
A	HIS16

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	3
Details	BINDING: BINDING => ECO:0000305|PubMed:24814345

Chain	Residue	Details
A	SER114
A	ARG140
A	HIS187

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site_id	SWS_FT_FI2
Number of Residues	2
Details	BINDING: BINDING => ECO:0000269|PubMed:24530688

Chain	Residue	Details
A	HIS125
A	ASP127

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