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4NPL

Crystal structure of Zebrafish ALKBH5 in complex with alpha-ketoglutarate

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
RNA demethylase ALKBH5polymer25028355.42UniProt (Q08BA6)
Pfam (PF13532)
Danio rerio (leopard danio zebra danio zebra fish)Alkylated DNA repair protein alkB homolog 5, Alpha-ketoglutarate-dependent dioxygenase alkB homolog 5
2C, E
(A, B)
MANGANESE (II) IONnon-polymer54.92Chemie (MN)
3D, F
(A, B)
2-OXOGLUTARIC ACIDnon-polymer146.12Chemie (AKG)
4G, H
(A, B)
waterwater18.0445Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight56710.9
Non-Polymers*Number of molecules4
Total formula weight402.1
All*Total formula weight57112.9
*Water molecules are not included.

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PDB entries from 2025-06-18

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