4M8N
Crystal Structure of PlexinC1/Rap1B Complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | PlexinC1 Intracellular Region | polymer | 599 | 69216.1 | 4 | UniProt (Q5RGW1) Pfam (PF08337) Pfam (PF20170) | Danio rerio (leopard danio zebra danio zebra fish) | |
| 2 | E, F, G, H (E, F, G, H) | Ras-related protein Rap-1b | polymer | 199 | 21409.8 | 4 | UniProt (P61224) Pfam (PF00071) | Homo sapiens (human) | GTP-binding protein smg p21B |
| 3 | I, L, O, R (E, F, G, H) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 4 | J, M, P, S (E, F, G, H) | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 4 | Chemie (GDP) | |||
| 5 | K, N, Q, T (E, F, G, H) | ALUMINUM FLUORIDE | non-polymer | 84.0 | 4 | Chemie (AF3) | |||
| 6 | U, V, W, X, Y (A, B, C, D, H) | water | water | 18.0 | 10 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 552 - 1147 (UniProt: Q5RGW1)
E, F, G, H: 1 - 166 (UniProt: P61224)
| PDB | External Database | Details |
|---|---|---|
| Gly 549 | - | expression tag |
| Gly 550 | - | expression tag |
| Ser 551 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Pro -1 | - | expression tag |
| His 0 | - | expression tag |
| Ser 167 | - | expression tag |
| Gly 168 | - | expression tag |
| Gly 169 | - | expression tag |
| Ser 170 | - | expression tag |
| Gly 171 | - | expression tag |
| Ser 172 | - | expression tag |
| Gly 173 | - | expression tag |
| Ser 174 | - | expression tag |
| Ser 175 | - | expression tag |
| Gly 176 | - | expression tag |
| Gly 177 | - | expression tag |
| Ser 178 | - | expression tag |
| Gly 179 | - | expression tag |
| Ser 180 | - | expression tag |
| Gly 181 | - | expression tag |
| Gly 182 | - | expression tag |
| Gly 183 | - | expression tag |
| Ser 184 | - | expression tag |
| Gly 185 | - | expression tag |
| Ser 186 | - | expression tag |
| Gly 187 | - | expression tag |
| Ser 188 | - | expression tag |
| Ser 189 | - | expression tag |
| Gly 190 | - | expression tag |
| Leu 191 | - | expression tag |
| Pro 192 | - | expression tag |
| Glu 193 | - | expression tag |
| Thr 194 | - | expression tag |
| Gly 195 | - | expression tag |
| Gly 196 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 362503.6 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 2205.9 | |
| All* | Total formula weight | 364709.5 |
