4M8N
Crystal Structure of PlexinC1/Rap1B Complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | PlexinC1 Intracellular Region | polymer | 599 | 69216.1 | 4 | UniProt (Q5RGW1) | Danio rerio (leopard danio zebra danio zebra fish) | |
| 2 | E, F, G, H (E, F, G, H) | Ras-related protein Rap-1b | polymer | 199 | 21409.8 | 4 | UniProt (P61224) Pfam (PF00071) | Homo sapiens (human) | GTP-binding protein smg p21B |
| 3 | I, L, O, R (E, F, G, H) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) PubChem (888) | |||
| 4 | J, M, P, S (E, F, G, H) | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 4 | Chemie (GDP) PubChem (136073927) PubChem (135398619) PubChem (135402030) PubChem (135431654) PubChem (135566337) PubChem (135760556) PubChem (136026707) PubChem (136053418) PubChem (136663964) PubChem (136664748) PubChem (136759848) PubChem (136759849) PubChem (136759850) PubChem (136836636) PubChem (136847074) PubChem (172898537) | |||
| 5 | K, N, Q, T (E, F, G, H) | ALUMINUM FLUORIDE | non-polymer | 84.0 | 4 | Chemie (AF3) PubChem (2124) | |||
| 6 | U, V, W, X, Y (A, B, C, D, H) | water | water | 18.0 | 10 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 552 - 1147 (UniProt: Q5RGW1)
E, F, G, H: 1 - 166 (UniProt: P61224)
| PDB | External Database | Details |
|---|---|---|
| Gly 549 | - | expression tag |
| Gly 550 | - | expression tag |
| Ser 551 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Pro -1 | - | expression tag |
| His 0 | - | expression tag |
| Ser 167 | - | expression tag |
| Gly 168 | - | expression tag |
| Gly 169 | - | expression tag |
| Ser 170 | - | expression tag |
| Gly 171 | - | expression tag |
| Ser 172 | - | expression tag |
| Gly 173 | - | expression tag |
| Ser 174 | - | expression tag |
| Ser 175 | - | expression tag |
| Gly 176 | - | expression tag |
| Gly 177 | - | expression tag |
| Ser 178 | - | expression tag |
| Gly 179 | - | expression tag |
| Ser 180 | - | expression tag |
| Gly 181 | - | expression tag |
| Gly 182 | - | expression tag |
| Gly 183 | - | expression tag |
| Ser 184 | - | expression tag |
| Gly 185 | - | expression tag |
| Ser 186 | - | expression tag |
| Gly 187 | - | expression tag |
| Ser 188 | - | expression tag |
| Ser 189 | - | expression tag |
| Gly 190 | - | expression tag |
| Leu 191 | - | expression tag |
| Pro 192 | - | expression tag |
| Glu 193 | - | expression tag |
| Thr 194 | - | expression tag |
| Gly 195 | - | expression tag |
| Gly 196 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 362503.6 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 2205.9 | |
| All* | Total formula weight | 364709.5 |
