4M7D
Crystal structure of Lsm2-8 complex bound to the RNA fragment CGUUU
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, H (A, H) | U6 snRNA-associated Sm-like protein LSm8 | polymer | 96 | 10722.3 | 2 | UniProt (P47093) Pfam (PF01423) | Saccharomyces cerevisiae (Baker's yeast) | |
| 2 | B, I (B, I) | U6 snRNA-associated Sm-like protein LSm2 | polymer | 95 | 11161.8 | 2 | UniProt (P38203) Pfam (PF01423) | Saccharomyces cerevisiae (Baker's yeast) | Small nuclear ribonucleoprotein D homolog SNP3 |
| 3 | C, J (C, J) | U6 snRNA-associated Sm-like protein LSm3 | polymer | 89 | 10007.1 | 2 | UniProt (P57743) Pfam (PF01423) | Saccharomyces cerevisiae (Baker's yeast) | SmX4 protein |
| 4 | D, K (D, K) | U6 snRNA-associated Sm-like protein LSm6 | polymer | 86 | 9406.6 | 2 | UniProt (Q06406) Pfam (PF01423) | Saccharomyces cerevisiae (Baker's yeast) | |
| 5 | E, L (E, L) | U6 snRNA-associated Sm-like protein LSm5 | polymer | 93 | 10433.0 | 2 | UniProt (P40089) Pfam (PF01423) | Saccharomyces cerevisiae (Baker's yeast) | |
| 6 | F, M (F, M) | U6 snRNA-associated Sm-like protein LSm7 | polymer | 115 | 13027.0 | 2 | UniProt (P53905) Pfam (PF01423) | Saccharomyces cerevisiae (Baker's yeast) | |
| 7 | G, N (G, N) | U6 snRNA-associated Sm-like protein LSm4 | polymer | 93 | 10627.1 | 2 | UniProt (P40070) Pfam (PF01423) | Saccharomyces cerevisiae (Baker's yeast) | |
| 8 | O, P (O, P) | U6 snRNA | polymer | 8 | 2442.4 | 2 | |||
| 9 | AA, BA, CA, DA, EA... (K, L, M, N, O...) | water | water | 18.0 | 90 | Chemie (HOH) |
Sequence modifications
A, H: 1 - 96 (UniProt: P47093)
B, I: 1 - 95 (UniProt: P38203)
C, J: 1 - 89 (UniProt: P57743)
| PDB | External Database | Details |
|---|---|---|
| Leu 17 | Lys 17 | engineered mutation |
| Ser 22 | Cys 22 | engineered mutation |
| Leu 38 | Ile 38 | engineered mutation |
| Ser 51 | Cys 51 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Ser 45 | Cys 45 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Ser 37 | Cys 37 | engineered mutation |
| Ser 63 | Cys 63 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 16 |
| Total formula weight | 155654.8 | |
| All* | Total formula weight | 155654.8 |
