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4LTC

Crystal structure of yeast 20S proteasome in complex with enone carmaphycin analogue 6

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, H
(A, O)
Proteasome subunit alpha type-2polymer25027191.82UniProt (P23639)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae (Baker's yeast)Macropain subunit Y7, Multicatalytic endopeptidase complex subunit Y7, Proteasome component Y7, Proteinase YSCE subunit 7
2B, I
(B, P)
Proteasome subunit alpha type-3polymer25828748.22UniProt (P23638)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae (Baker's yeast)Macropain subunit Y13, Multicatalytic endopeptidase complex subunit Y13, Proteasome component Y13, Proteinase YSCE subunit 13
3C, J
(C, Q)
Proteasome subunit alpha type-4polymer25428478.12UniProt (P40303)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae (Baker's yeast)Macropain subunit PRE6, Multicatalytic endopeptidase complex subunit PRE6, Proteasome component PRE6, Proteinase YSCE subunit PRE6
4D, K
(D, R)
Proteasome subunit alpha type-5polymer26028649.12UniProt (P32379)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae (Baker's yeast)Macropain subunit PUP2, Multicatalytic endopeptidase complex subunit PUP2, Proteasome component PUP2, Proteinase YSCE subunit PUP2
5E, L
(E, S)
Proteasome subunit alpha type-6polymer23425634.02UniProt (P40302)
Pfam (PF00227)
Pfam (PF10584)
Saccharomyces cerevisiae (Baker's yeast)Macropain subunit PRE5, Multicatalytic endopeptidase complex subunit PRE5, Proteasome component PRE5, Proteinase YSCE subunit PRE5
6F, M
(F, T)
Probable proteasome subunit alpha type-7polymer28731443.92UniProt (P21242)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae (Baker's yeast)Macropain subunit C1, Multicatalytic endopeptidase complex subunit C1, Proteasome component C1, Proteinase YSCE subunit 1
7G, N
(G, U)
Proteasome subunit alpha type-1polymer25228033.82UniProt (P21243)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae (Baker's yeast)Macropain subunit C7-alpha, Multicatalytic endopeptidase complex C7, Proteasome component C7-alpha, Proteasome component Y8, Proteinase YSCE subunit 7, SCL1 suppressor protein
8O, V
(H, V)
Proteasome subunit beta type-2polymer23225114.52UniProt (P25043)
Pfam (PF00227)
Pfam (PF12465)
Saccharomyces cerevisiae (Baker's yeast)Macropain subunit PUP1, Multicatalytic endopeptidase complex subunit PUP1, Proteasome component PUP1, Proteinase YSCE subunit PUP1
9P, W
(I, W)
Proteasome subunit beta type-3polymer20522627.82UniProt (P25451)
Pfam (PF00227)
Saccharomyces cerevisiae (Baker's yeast)Macropain subunit PUP3, Multicatalytic endopeptidase complex subunit PUP3, Proteasome component PUP3
10Q, X
(J, X)
Proteasome subunit beta type-4polymer19822545.72UniProt (P22141)
Pfam (PF00227)
Saccharomyces cerevisiae (Baker's yeast)Macropain subunit C11, Multicatalytic endopeptidase complex subunit C11, Proteasome component C11, Proteinase YSCE subunit 11
11R, Y
(K, Y)
Proteasome subunit beta type-5polymer21223325.22UniProt (P30656)
Pfam (PF00227)
Saccharomyces cerevisiae (Baker's yeast)Macropain subunit PRE2, Multicatalytic endopeptidase complex subunit PRE2, Proteasome component PRE2, Proteinase YSCE subunit PRE2
12S, Z
(L, Z)
Proteasome subunit beta type-6polymer22224883.92UniProt (P23724)
Pfam (PF00227)
Saccharomyces cerevisiae (Baker's yeast)Multicatalytic endopeptidase complex subunit C5, Proteasome component C5
13AA, T
(M, a)
Proteasome subunit beta type-7polymer23325945.52UniProt (P30657)
Pfam (PF00227)
Saccharomyces cerevisiae (Baker's yeast)Macropain subunit PRE4, Multicatalytic endopeptidase complex subunit PRE4, Proteasome component PRE4, Proteinase YSCE subunit PRE4
14BA, U
(N, b)
Proteasome subunit beta type-1polymer19621517.22UniProt (P38624)
Pfam (PF00227)
Saccharomyces cerevisiae (Baker's yeast)Macropain subunit PRE3, Multicatalytic endopeptidase complex subunit PRE3, Proteasome component PRE3, Proteinase YSCE subunit PRE3
15CA, DA
(K, Y)
N-hexanoyl-L-valyl-N~1~-[(4S,5S,6R)-5-hydroxy-2,6-dimethyloctan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamidenon-polymer526.82BIRD (PRD_001161)
Chemie (EC6)
16AB, BB, CB, DB, EA...
(W, X, Y, Z, A...)
waterwater18.02607Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains28
Total formula weight728277.6
Non-Polymers*Number of molecules2
Total formula weight1053.5
All*Total formula weight729331.1
*Water molecules are not included.

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PDB entries from 2025-06-11

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