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4LQ3

Crystal structure of human norovirus RNA-dependent RNA-polymerase bound to the inhibitor PPNDS

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
RNA-dependent RNA-polymerasepolymer52658657.81UniProt (Q2N379)
Pfam (PF00680)
Norovirus
2B
(R)
5'-R(P*GP*G)-3'polymer2645.51
3C, D, E, F
(A)
3-[(E)-{4-formyl-5-hydroxy-6-methyl-3-[(phosphonooxy)methyl]pyridin-2-yl}diazenyl]-7-nitronaphthalene-1,5-disulfonic acidnon-polymer606.44Chemie (20V)
4G
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
5H, I
(A, R)
waterwater18.0132Chemie (HOH)
Sequence modifications
A: 3 - 510 (UniProt: Q2N379)
PDBExternal DatabaseDetails
Met 0-expression tag
Gly 1-expression tag
Gly 2-expression tag
Gly 153Glu 153conflict
Val 511-expression tag
Asp 512-expression tag
Lys 513-expression tag
Leu 514-expression tag
Ala 515-expression tag
Ala 516-expression tag
Ala 517-expression tag
Leu 518-expression tag
Glu 519-expression tag
His 520-expression tag
His 521-expression tag
His 522-expression tag
His 523-expression tag
His 524-expression tag
His 525-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight59303.2
Non-Polymers*Number of molecules5
Total formula weight2450.0
All*Total formula weight61753.3
*Water molecules are not included.

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PDB entries from 2025-07-09

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