4L6T
GM1 bound form of the ECX AB5 holotoxin
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | ECXA | polymer | 266 | 29492.9 | 1 | UniProt (Q8GAV4) Pfam (PF16313) In PDB | Escherichia coli | |
2 | B, C, D, E, F | ECXB | polymer | 112 | 12775.5 | 5 | UniProt (Q8GAV3) Pfam (PF01376) In PDB | Escherichia coli | |
3 | G, H, I, J, K | beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-[N-acetyl-alpha-neuraminic acid-(2-3)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | branched | 998.9 | 5 | In PDB GlyTouCan (G48558GR) | |||
4 | A | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
5 | water | water | 18.0 | 561 | Chemie (HOH) |
Sequence modifications
A: 21 - 284 (UniProt: Q8GAV4)
B, C, D, E, F: 23 - 125 (UniProt: Q8GAV3)
PDB | External Database | Details |
---|---|---|
Met 20 | - | initiating methionine |
PDB | External Database | Details |
---|---|---|
Met 22 | - | initiating methionine |
Leu 126 | - | expression tag |
Glu 127 | - | expression tag |
His 128 | - | expression tag |
His 129 | - | expression tag |
His 130 | - | expression tag |
His 131 | - | expression tag |
His 132 | - | expression tag |
His 133 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 93370.2 | |
Branched | Number of molecules | 5 |
Total formula weight | 4994.4 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 65.4 | |
All* | Total formula weight | 98430.1 |