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4KJY

Complex of high-affinity SIRP alpha variant FD6 with CD47

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Leukocyte surface antigen CD47polymer12514245.02UniProt (Q08722)
Pfam (PF08204)
Homo sapiens (human)Antigenic surface determinant protein OA3, Integrin-associated protein, IAP, Protein MER6
2B, D
(B, D)
High-affinity SIRPa variant FD6polymer13314523.22Homo sapiens (human)
3E, N, O
(A, C, D)
SULFATE IONnon-polymer96.13Chemie (SO4)
4F, G, H, I, J...
(A, C)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.28Chemie (NAG)
5P, Q, R, S
(A, B, C, D)
waterwater18.0378Chemie (HOH)
Sequence modifications
A, C: 1 - 117 (UniProt: Q08722)
PDBExternal DatabaseDetails
Gly 15Cys 33engineered mutation
Thr 118-expression tag
Arg 119-expression tag
His 120-expression tag
His 121-expression tag
His 122-expression tag
His 123-expression tag
His 124-expression tag
His 125-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight57536.5
Non-Polymers*Number of molecules11
Total formula weight2057.9
All*Total formula weight59594.4
*Water molecules are not included.

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PDB entries from 2025-06-18

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