4KJY
Complex of high-affinity SIRP alpha variant FD6 with CD47
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 120 |
Detector technology | CCD |
Collection date | 2011-09-09 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.00000 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 71.340, 71.340, 399.180 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 31.291 - 1.930 |
R-factor | 0.2206 |
Rwork | 0.219 |
R-free | 0.26210 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.947 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.160 | 1.900 |
Rmerge | 0.089 | ||
Number of reflections | 36706 | ||
<I/σ(I)> | 21.4 | ||
Completeness [%] | 83.1 | 97.3 | 30.3 |
Redundancy | 8.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.3 | 295 | Crystals were obtained by addition of 0.1 microL protein to an equal volume of 2.0 M ammonium sulfate and 0.1 M Tris, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 295K |