4FKY
Crystal structure of nucleoside diphosphate kinase B from Trypanosoma brucei bound to GTP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Nucleoside diphosphate kinase | polymer | 161 | 17910.4 | 3 | UniProt (Q381H3) Pfam (PF00334) | Trypanosoma brucei brucei | NDK B |
| 2 | D, F, I (A, B, C) | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 3 | Chemie (GDP) | |||
| 3 | E, G, J (A, B, C) | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) | |||
| 4 | H (B) | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 1 | Chemie (MPD) | |||
| 5 | K, L, M (A, B, C) | water | water | 18.0 | 499 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 153 (UniProt: Q381H3)
| PDB | External Database | Details |
|---|---|---|
| Met -7 | - | expression tag |
| Ala -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 53731.3 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 1520.7 | |
| All* | Total formula weight | 55252.0 |






