4EUW
Crystal structure of a HMG domain of transcription factor SOX-9 bound to DNA (SOX-9/DNA) from Homo sapiens at 2.77 A resolution
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Transcription factor SOX-9 | polymer | 106 | 12917.7 | 1 | UniProt (P48436) Pfam (PF00505) In PDB | Homo sapiens (human) | |
| 2 | B | DNA (5'-D(*CP*TP*CP*TP*TP*TP*GP*AP*GP*AP*AP*G)-3') | polymer | 12 | 3677.4 | 1 | Homo sapiens | ||
| 3 | C | DNA (5'-D(*CP*TP*TP*CP*TP*CP*AP*AP*AP*GP*AP*G)-3') | polymer | 12 | 3646.4 | 1 | Homo sapiens | ||
| 4 | water | water | 18.0 | 7 | Chemie (HOH) |
Sequence modifications
A: 98 - 181 (UniProt: P48436)
| PDB | External Database | Details |
|---|---|---|
| Met -21 | - | expression tag |
| Ala -20 | - | expression tag |
| His -19 | - | expression tag |
| His -18 | - | expression tag |
| His -17 | - | expression tag |
| His -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| Val -13 | - | expression tag |
| Asp -12 | - | expression tag |
| Asp -11 | - | expression tag |
| Asp -10 | - | expression tag |
| Asp -9 | - | expression tag |
| Lys -8 | - | expression tag |
| Met -7 | - | expression tag |
| Ser -6 | - | expression tag |
| Glu -5 | - | expression tag |
| Asn -4 | - | expression tag |
| Leu -3 | - | expression tag |
| Tyr -2 | - | expression tag |
| Phe -1 | - | expression tag |
| Gln 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 20241.5 | |
| All* | Total formula weight | 20241.5 |
