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4E7K

PFV integrase Target Capture Complex (TCC-Mn), freeze-trapped prior to strand transfer, at 3.0 A resolution

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Pro-Pol polyproteinpolymer39544456.72UniProt (P14350)
Pfam (PF17921)
Pfam (PF00665)
Pfam (PF18103)
Human spumaretrovirus (SFVcpz(hu))Pr125Pol, Protease/Reverse transcriptase/ribonuclease H, p87Pro-RT-RNaseH, Protease/Reverse transcriptase, p65Pro-RT, Ribonuclease H, RNase H, Integrase, IN, p42In
2C
(C)
DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3')polymer195834.81synthetic DNA
3D
(D)
DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')polymer175195.41synthetic DNA
4E
(T)
DNA (5'-D(*CP*CP*CP*GP*AP*GP*GP*CP*AP*CP*GP*TP*GP*CP*TP*AP*GP*CP*AP*CP*GP*TP*GP*CP*CP*TP*CP*GP*GP*G)-3')polymer309226.91synthetic DNA
5F
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
6G, H, I
(A, B)
MANGANESE (II) IONnon-polymer54.93Chemie (MN)
7J
(B)
SULFATE IONnon-polymer96.11Chemie (SO4)
8K
(T)
TRIETHYLENE GLYCOLnon-polymer150.21Chemie (PGE)
9L, M
(A, B)
waterwater18.012Chemie (HOH)
Sequence modifications
A, B: 1 - 392 (UniProt: P14350)
PDBExternal DatabaseDetails
Gly -2-expression tag
Pro -1-expression tag
Gly 0-expression tag
Ser 217Gly 968variant
Gly 218Ser 969variant
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight109170.5
Non-Polymers*Number of molecules6
Total formula weight476.5
All*Total formula weight109646.9
*Water molecules are not included.

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PDB entries from 2025-06-25

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